rs6687391 chr1:223684237 G>A

Sequence
taacaaggaccaggaggcaccaga[G/A]acaaacccagctcctcactgcagc
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.49 0.74 0.740.03 1.20 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Cells_Cultured_fibroblasts Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

Download