rs6688134 chr1:18909112 G>A
- Sequence
gcaaaccgtttaacctgcctgagc[G/A]tctgctcttctgtctggataatgg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN KDM1A_HUMAN NCOR1_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 1.60 | n/a | 1.50 | n/a | n/a | |||
| KDM1A_HUMAN | 1.43 | 0.23 | 1.00 | n/a | n/a | |||
| NCOR1_HUMAN | 2.00 | -2.35 | 1.33 | n/a | n/a | |||
| HDAC1_HUMAN | 2.23 | -0.79 | 1.00 | n/a | n/a | |||
| RING2_HUMAN | 2.44 | -2.37 | 1.25 | n/a | n/a |
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