ADASTRA v5.1.3
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rs6689470
chr1:92485653
G
>
A
Sequence
ggaggtggggcggcccctccgcgc[G/A]ctcaggcctctcctcaccgtccgg
ASB in cell types
HEK293 (embryonic kidney)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RFOX2_HUMAN
ZFX_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFOX2_HUMAN
-0.97
1.67
1.00
0.03
1.17
n/a
n/a
ZFX_HUMAN
1.23
-0.87
0.04
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
multiple sclerosis
Finemapping
multiple sclerosis
GTEx eQTL
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)