rs6689470 chr1:92485653 G>A

Sequence
ggaggtggggcggcccctccgcgc[G/A]ctcaggcctctcctcaccgtccgg
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RFOX2_HUMAN ZFX_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFOX2_HUMAN -0.97 1.67 1.000.03 1.17 n/a n/a
ZFX_HUMAN 1.23 -0.87 0.041.00 1.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

EMBL-EBI multiple sclerosis
Finemapping multiple sclerosis
GTEx eQTL Esophagus_Mucosa Esophagus_Muscularis Lung Thyroid

Download