rs67070254 chr1:227318273 A>T
- Sequence
cccctgggctaagggcatctttcc[A/T]cagcgaggagggaggcggcccggc
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) 22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ZN341_HUMAN PRD10_HUMAN ANDR_HUMAN GCR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN341_HUMAN | -0.04 | 1.34 | 4.50 | n/a | No Hit | |||
| PRD10_HUMAN | n/a | 1.72 | 4.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.60 | -1.82 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.31 | 1.21 | 1.09 | n/a | No Hit | |||
| FOXM1_HUMAN | -2.11 | 2.90 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood