rs6715873 chr2:101973264 A>G

Sequence
atctgagatgctgacatgatagta[A/G]ctccgggtggccaggaagtaatat
ASB in cell types
HKC8 (kidney proximal tubule cell line) BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN E2F8_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.98 0.07 0.031.00 1.00 n/a No Hit
E2F8_HUMAN 1.26 -0.86 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  college completion,  serum creatinine,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Liver,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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