ADASTRA v5.1.3
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rs6719989
chr2:129979730
C
>
G
Sequence
cgaagcgccgcgcgtgagagatcc[C/G]ggatacatctgcggtttgggctcc
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
TTC-1240 (Rhabdoid tumor of the kidney)
2.25
-1.90
0.03
1.00
1.50
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale