rs67289879 chr6:42039665 C>T

Sequence
ggaaaagcttgtttgcaccattgc[C/T]gcagttggggtggctgtggttggg
ASB in cell types
K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN FLI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.37 0.39 2.1·10-31.00 1.17 n/a n/a
FLI1_HUMAN 1.84 0.26 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI crohns disease inflammatory bowel disease
GTEx eQTL Heart_Left_Ventricle

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