rs6752623 chr2:176086198 G>A
- Sequence
ggatgcccaattctgccatgcctg[G/A]cagtcgctgctcctgtgacccagg
- ASB in cell types
- HEK293 (embryonic kidney) GM19193 (female B-cells Lymphoblastoid Cell Lines) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- ZBT17_HUMAN SCRT2_HUMAN ZN335_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT17_HUMAN | n/a | 3.27 | 1.00 | n/a | No Hit | |||
| SCRT2_HUMAN | -2.99 | 3.05 | 1.00 | n/a | n/a | |||
| ZN335_HUMAN | -1.91 | 2.31 | 1.00 | -0.63 | Weak Discordant | |||
| STAG1_HUMAN | -0.31 | 0.97 | 1.00 | n/a | n/a |
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Motif analysis
