rs6755863 chr2:30290994 G>A
- Sequence
ggccaaccaggaaccaaacctggg[G/A]tagtaggtgttccttgaggcagag
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- IKZF1_HUMAN NCOR1_HUMAN ARI1B_HUMAN GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 3.85 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | -4.66 | 1.51 | 2.00 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 0.87 | 2.00 | n/a | n/a | |||
| GATA1_HUMAN | 0.50 | 2.65 | 2.00 | n/a | No Hit | |||
| ATF3_HUMAN | n/a | 1.39 | 2.00 | n/a | No Hit |
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