rs6774478 chr3:62051825 T>C
- Sequence
gtgccaggtggttacatgtcttat[T/C]tggcaggtattcaatggaaagaat
- ASB in cell types
- HEK293 (embryonic kidney) GM19238 (female B-cells lymphoblastoid cell lines) Ishikawa (endometrial adenocarcinoma) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.78 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | 0.08 | 1.40 | 2.13 | n/a | n/a |
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