rs6776462 chr3:105518416 G>C
- Sequence
tctacctgtgaagtgtatgaacaa[G/C]acttaatacacacagcagaaattc
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) RWPE2 GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.13 | 3.35 | 1.47 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, fasting blood glucose, height, infant head circumference, systolic blood pressure (sbp)