rs6778567 chr3:192893551 T>C

Sequence
cagaagaaggctgccaacacccct[T/C]gactgtatgggaaaacatcgcatt
ASB in cell types
CD14+ monocytes macrophages form periferal blood
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.27 -4.79 3.5·10-51.00 2.00 n/a No Hit
SPI1_HUMAN 1.72 0.74 6.1·10-31.00 1.50 n/a No Hit
STAG1_HUMAN -0.74 1.54 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease bipolar disorder
GTEx eQTL Adipose_Visceral_Omentum Esophagus_Mucosa

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