rs6787621 chr3:188349165 T>G
- Sequence
acactggctgctttaccctattac[T/G]caattcctagaggggaagaatttt
- ASB in cell types
- SUM159PT (Triple negative breast cancer) SU-DHL-1 (Anaplastic large cell lymphoma) HepG2 (hepatoblastoma) MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
- ASB for transcription factors
- CEBPB_HUMAN CEBPA_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.83 | 2.59 | 1.27 | 5.30 | Concordant | |||
| CEBPA_HUMAN | -0.13 | 2.81 | 1.62 | -0.39 | Weak Discordant | |||
| GCR_HUMAN | 0.03 | 0.61 | 1.38 | n/a | No Hit |
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Motif analysis
