rs67924016 chr10:54716308 T>C
- Sequence
ccacctattttgaccacaggtggc[T/C]catacccataagtgacacctactg
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia) LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.17 | 2.56 | 1.30 | 0.92 | Weak Concordant |
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Motif analysis
