ADASTRA v5.1.3
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rs6794
chr3:45011283
G
>
C
Sequence
ctgcatgcctccttgcagagtgtt[G/C]tgcacaaggaagaaagcctggggc
ASB in cell types
BEAS-2B (bronchial epithelium)
LHSAR (prostate epithelial cells)
ASB for transcription factors
GCR_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN
-0.09
1.56
1.00
6.4·10
-7
1.00
n/a
No Hit
ANDR_HUMAN
0.67
3.96
0.57
4.4·10
-5
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
handedness in individuals with dyslexia (pegq test)
,
ldl cholesterol
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellum
,
Brain_Spinal_cord_cervical_c-1
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)