rs68078958 chr20:23782601 G>T
- Sequence
acccatggatgaccagccctttgg[G/T]tgcctctactccagcctcaccctg
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN TRI22_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.47 | 0.26 | 1.44 | n/a | No Hit | |||
| STAG1_HUMAN | 2.28 | 0.14 | 1.08 | n/a | n/a | |||
| TRI22_HUMAN | 2.38 | n/a | 1.00 | n/a | n/a |
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