rs68133756 chr1:227318333 T>C
- Sequence
ggtcgcttccgcggctgaggagac[T/C]agaggctgcggcagcccggctccc
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- BRD2_HUMAN ZFX_HUMAN SP3_HUMAN KLF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD2_HUMAN | 1.37 | 0.24 | 2.53 | n/a | n/a | |||
| ZFX_HUMAN | 0.26 | 1.75 | 2.08 | n/a | No Hit | |||
| SP3_HUMAN | n/a | 2.42 | 4.00 | n/a | No Hit | |||
| KLF1_HUMAN | n/a | 2.02 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood