rs6827747 chr4:26857575 C>A
- Sequence
ccatctcgcggctgccgggcgccc[C/A]gcccacagagtgggagccggaagc
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- TF65_HUMAN ANDR_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 3.05 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 3.20 | n/a | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.42 | -4.65 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Spleen