rs6828144 chr4:15725766 T>C

Sequence
gttcttactgagttagtcagatga[T/C]ctgaaattgtcagttttcttatct
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.94 -5.17 4.1·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  microalbuminuria,  systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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