ADASTRA v5.1.3
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rs6850
chr7:44796715
A
>
G
Sequence
cgccaccgccgaggaaaaccgtgt[A/G]ctattagccatggtcaaccccacc
ASB in cell types
HEK293 (embryonic kidney)
WA09 (embryonic stem cells)
primary B-CLL cells
thymus-derived CD34- cells
ASB for transcription factors
TP53B_HUMAN
BRD4_HUMAN
GLI4_HUMAN
BC11B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TP53B_HUMAN
2.07
-1.38
2.0·10
-3
1.00
1.50
n/a
n/a
BRD4_HUMAN
1.67
0.23
9.0·10
-3
0.86
1.54
n/a
n/a
GLI4_HUMAN
2.75
-2.55
0.02
1.00
1.00
n/a
n/a
BC11B_HUMAN
n/a
2.76
1.00
0.03
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Prostate
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)