rs6874130 chr5:138283236 G>C

Sequence
accttctgggctttgagttcaagg[G/C]attagggagaaggccacagagaca
ASB in cell types
foreskin keratinocyte HMEC (human mammary epithelial cells)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 1.71 n/a 3.2·10-31.00 2.33
HMEC (human mammary epithelial cells) 1.98 0.01 0.051.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) schizophrenia total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts

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