rs6892624 chr5:127564390 A>G
- Sequence
gagggcaccagttgcacatcaaat[A/G]tctaatgtgtaggtgtcaatgccc
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM02255 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.45 | 0.85 | 1.04 | n/a | n/a | |||
| CTCF_HUMAN | 0.84 | 0.42 | 1.43 | n/a | No Hit |
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