rs6900796 chr6:126041008 T>C
- Sequence
agctttgggccagcttgccactga[T/C]ttccttatgactaactctttaaat
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.23 | 1.45 | 2.23 | 2.45 | Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, advanced age-related macular degeneration, height, ldl cholesterol change with statins, total cholesterol change with statins, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Pancreas, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid