rs6914950 chr6:32622587 C>T
- Sequence
gagaatatacttgtgctcttcctc[C/T]atggcccagcatatgcacagggct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN SMCA5_HUMAN ZN207_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.23 | 0.17 | 3.25 | n/a | No Hit | |||
| SMCA5_HUMAN | 2.32 | -4.16 | 1.50 | n/a | No Hit | |||
| ZN207_HUMAN | 2.76 | -2.50 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.29 | -2.54 | 1.50 | n/a | No Hit |
Items per page:
1 – 4 of 4