rs6918446 chr6:53437741 G>A

Sequence
ctaagcatcatgtaaactggtgac[G/A]atggtagactgggaagaataaaat
ASB in cell types
K562 (myelogenous leukemia) RWPE1 (prostate epithelial cells) RWPE2 adult erythroblasts
ASB for transcription factors
ATF1_HUMAN E2F1_HUMAN KDM6A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF1_HUMAN 2.85 n/a 2.9·10-31.00 2.00 n/a No Hit
E2F1_HUMAN 2.66 n/a 0.031.00 3.00 n/a No Hit
KDM6A_HUMAN 2.35 n/a 0.031.00 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose diastolic blood pressure (dbp) fasting insulin homa-b systolic blood pressure (sbp)
GTEx eQTL Muscle_Skeletal

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