rs6924639 chr6:122744435 T>C
- Sequence
gtagctgtcgctgtaattcaattt[T/C]acctaactcttggggagtgcctgg
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) esophagus squamous epithelium adrenal gland
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.12 | -0.74 | 1.54 | n/a | No Hit | |||
| STAG1_HUMAN | 2.33 | n/a | 2.00 | n/a | n/a |
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