rs6933720 chr6:167398505 G>T
- Sequence
gtttaccagcgacctccatccatg[G/T]ccaagagttcatggagttcatgtt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- NR2F6_HUMAN FOXA2_HUMAN RARA_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2F6_HUMAN | 2.42 | n/a | 2.00 | n/a | n/a | |||
| FOXA2_HUMAN | 2.18 | n/a | 2.00 | n/a | No Hit | |||
| RARA_HUMAN | 1.78 | n/a | 2.00 | -1.18 | Weak Concordant | |||
| CREB1_HUMAN | 2.13 | -4.44 | 2.00 | n/a | No Hit | |||
| SMAD4_HUMAN | 1.78 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
