rs6999047 chr8:101975514 A>G

Sequence
agcctacagaaacggccttgctct[A/G]ttggaaaatggaggcaccaaaaat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.91 1.84 1.000.02 1.00 n/a No Hit
STAG1_HUMAN -0.79 1.31 1.000.04 1.08 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex Brain_Frontal_Cortex_BA9 Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic

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