rs701726 chr21:31344139 G>C
- Sequence
tcgatttcaaaattcaagctcacc[G/C]ctgctcaacaaggcgcgcacgttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney) neural cell HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- IKZF1_HUMAN RELB_HUMAN TCF21_HUMAN BHE40_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.23 | n/a | 3.50 | n/a | No Hit | |||
| RELB_HUMAN | 2.62 | -2.34 | 1.00 | n/a | No Hit | |||
| TCF21_HUMAN | -1.51 | 2.55 | 2.00 | n/a | n/a | |||
| BHE40_HUMAN | 1.75 | -0.77 | 2.17 | n/a | No Hit |
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