rs707846 chr6:16711643 A>G
- Sequence
tatagattgtttgttttgcgacac[A/G]tcattctgttgcccaggctggaag
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) CFPAC-1(pancreatic ductal adenocarcinoma) GM12890 (Lymphoblastoid Cell Lines) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN FOXA2_HUMAN RAD21_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.18 | 0.52 | 1.38 | n/a | No Hit | |||
| FOXA2_HUMAN | -0.85 | 2.17 | 1.50 | n/a | No Hit | |||
| RAD21_HUMAN | 1.41 | 0.21 | 1.00 | n/a | n/a | |||
| JUN_HUMAN | -0.07 | 0.94 | 1.25 | n/a | No Hit | |||
| FOXA1_HUMAN | -1.74 | 2.12 | 1.75 | n/a | No Hit |
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