rs7083150 chr10:38527789 A>G
- Sequence
tgtggaacggaatggacacgaatg[A/G]aatggagtggaatagactcaaatg
- ASB in cell types
- HepG2 (hepatoblastoma) upper lobe of left lung breast tumor HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN EP300_HUMAN ESR1_HUMAN TBX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.82 | 1.90 | 1.56 | n/a | No Hit | |||
| EP300_HUMAN | -0.80 | 2.72 | 2.92 | n/a | n/a | |||
| ESR1_HUMAN | n/a | 3.73 | 2.00 | n/a | No Hit | |||
| TBX3_HUMAN | n/a | 2.83 | 3.50 | n/a | No Hit | |||
| ZBT40_HUMAN | n/a | 3.74 | 3.00 | n/a | n/a |
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