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rs7087 chr1:26170160 T>C

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.18 0.27 2.3·10-101.00 1.23 0.14 Weak Discordant
STAG1_HUMAN 1.23 -0.08 3.5·10-51.00 1.00 n/a n/a
NR2C1_HUMAN 1.79 0.39 2.6·10-41.00 1.00 n/a No Hit
MNT_HUMAN 1.29 -0.45 1.2·10-31.00 1.00 n/a n/a
EP400_HUMAN 0.92 -0.92 5.2·10-31.00 1.00 n/a n/a
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Motif analysis

ZFX_HUMAN Concordant
ZFX_HUMAN pic

Genetic associations

GRASP height infant head circumference waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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