rs708832 chr12:115817680 C>G
- Sequence
ctcgtgacgggatcagggcacagg[C/G]acattgagtaccagggactcaggc
- ASB in cell types
- ER+ breast tumor 22RV1 (prostate carcinoma) VCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.09 | 1.33 | 1.47 | n/a | No Hit | |||
| ESR1_HUMAN | 0.78 | 2.67 | 2.00 | 3.72 | Concordant |
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Motif analysis
