ADASTRA v5.1.3
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rs7097008
chr10:67849782
C
>
A
Sequence
gcctctcgtttttccttccagcct[C/A]gcttcaaagttctgtattgcagaa
ASB in cell types
K562 (myelogenous leukemia)
pancreas
adrenal gland
gastroesophageal sphincter
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(+7 others)
ASB for transcription factors
CTCF_HUMAN
NCOR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
-0.18
2.61
1.00
3.4·10
-43
1.02
n/a
No Hit
NCOR1_HUMAN
-0.84
1.67
1.00
0.01
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
fasting insulin
,
homa-b
,
homa-ir
,
systolic blood pressure (sbp)
GTEx eQTL
Adrenal_Gland
,
Colon_Transverse
,
Esophagus_Mucosa
,
Lung
,
Muscle_Skeletal
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)