rs7104221 chr11:9219901 G>A

Sequence
aatctcagagacaaagaatgtgga[G/A]taatgcagtagattaacacatttt
ASB in cell types
Kasumi-1 (acute myeloblastic leukemia) GM23248
ASB for transcription factors
CEBPA_HUMAN CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPA_HUMAN 2.15 -3.37 9.2·10-41.00 1.50 -4.36 Concordant
CEBPB_HUMAN 1.27 0.16 0.021.00 1.85 n/a No Hit
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Motif analysis

CEBPA_HUMAN Concordant
CEBPA_HUMAN pic

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder),  bipolar disorder,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Thyroid

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