rs7118569 chr11:75815437 C>G
- Sequence
cgcctccgcgtcggtcgggggccc[C/G]gtcccccagccacccccgggcccg
- ASB in cell types
- 22RV1 (prostate carcinoma) T-cells
- ASB for transcription factors
- ANDR_HUMAN RAG2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.03 | n/a | 2.00 | n/a | No Hit | |||
| RAG2_HUMAN | 2.62 | -2.34 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood