rs712492 chr14:24846399 C>T
- Sequence
ctgtttgtatctttgaatgactaa[C/T]acgttatgcctttgagatctccat
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.45 | 1.39 | 1.49 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, hdl cholesterol, prop taste detection threshold, total cholesterol, triglycerides