rs71318332 chr3:183636220 G>A

Sequence
aacggggcgctgctttttatttca[G/A]gaagcccgggggagtgcgaccgcc
ASB in cell types
macrophages 22RV1 (prostate carcinoma)
ASB for transcription factors
CEBPB_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.65 -0.15 7.5·10-41.00 1.80 n/a No Hit
ANDR_HUMAN 2.12 -4.13 9.4·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cortex,  Brain_Hypothalamus,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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