rs7131942 chr12:105367173 T>G
- Sequence
tgaagtccttttgactgatagata[T/G]cttcttgctcaaggcaatttttaa
- ASB in cell types
- 22RV1 (prostate carcinoma) SK-N-BE(2)-C (neuroblastoma)
- ASB for transcription factors
- HXC9_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HXC9_HUMAN | n/a | 2.59 | 1.00 | n/a | No Hit | |||
| HXB13_HUMAN | 2.37 | -0.53 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Prostate, Testis