ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs71424182
chr2:65431001
C
>
A
Sequence
gccccgcccccgtcgcacccgaga[C/A]tgaaaacgcctcagaccagggagg
ASB in cell types
breast tumor
HEK293 (embryonic kidney)
22RV1 (prostate carcinoma)
MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
ESR1_HUMAN
ANDR_HUMAN
TYY1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
2.43
0.44
7.2·10
-4
1.00
1.17
n/a
No Hit
ANDR_HUMAN
2.67
-1.47
1.3·10
-3
1.00
2.00
n/a
No Hit
TYY1_HUMAN
1.82
0.41
0.03
1.00
1.75
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Testis
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)