rs71440841 chr12:101697601 C>G
- Sequence
cctccccgcccctagcaggacccc[C/G]tccgccccgcccccagccggaccc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MDA-MB-231ERb(triple negative breast cancer) T47D (invasive ductal carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ESR1_HUMAN ESR2_HUMAN TYY1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.15 | 2.67 | 2.07 | n/a | No Hit | |||
| ESR2_HUMAN | -0.64 | 1.88 | 2.00 | 4.06 | Concordant | |||
| TYY1_HUMAN | -0.44 | 1.79 | 1.50 | n/a | No Hit |
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Motif analysis
