rs71477837 chr10:3783959 T>G
- Sequence
gagggggaaaaggcaggagaggac[T/G]gtgaacaattaagcaggcgtgtga
- ASB in cell types
- pancreas 22RV1 (prostate carcinoma) upper lobe of left lung breast tumor
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.27 | 3.38 | 1.00 | 3.47 | Concordant | |||
| ESR1_HUMAN | 1.58 | -0.25 | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | 2.04 | -1.84 | 1.00 | n/a | No Hit |
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Motif analysis
