rs71562659 chr7:105532059 T>C
- Sequence
gcgaatcccttctctggagctcca[T/C]aggggagggtgcccgcttcctgag
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- SMCA4_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 0.21 | 1.38 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.53 | 0.65 | 1.39 | 4.13 | Discordant |
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Motif analysis
