rs7186799 chr16:57186104 A>C
- Sequence
gagctcttcctccccgggagcccg[A/C]tggaaatccggtaccctgaaaacg
- ASB in cell types
- spleen HepG2 (hepatoblastoma) HEK293 (embryonic kidney) breast tumor
- ASB for transcription factors
- CTCF_HUMAN RBM25_HUMAN PRD10_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.31 | 3.15 | 1.61 | n/a | No Hit | |||
| RBM25_HUMAN | 0.54 | -3.02 | 2.00 | n/a | n/a | |||
| PRD10_HUMAN | -4.65 | 2.55 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Coronary, Brain_Cerebellum, Cells_Cultured_fibroblasts, Spleen, Testis