rs72040 chr3:64187137 G>A

Sequence
agtccctgctggtggaatctggcc[G/A]tgttgctgctgacttcatctggca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney)
ASB for transcription factors
INSM2_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
INSM2_HUMAN 2.83 -2.82 0.031.00 1.00 n/a n/a
FOXA1_HUMAN 1.35 -0.21 0.041.00 2.58 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Cells_Cultured_fibroblasts Thyroid

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