ADASTRA v5.1.3
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rs72040
chr3:64187137
G
>
A
Sequence
agtccctgctggtggaatctggcc[G/A]tgttgctgctgacttcatctggca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
HEK293 (embryonic kidney)
ASB for transcription factors
INSM2_HUMAN
FOXA1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
INSM2_HUMAN
2.83
-2.82
0.03
1.00
1.00
n/a
n/a
FOXA1_HUMAN
1.35
-0.21
0.04
1.00
2.58
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL
Cells_Cultured_fibroblasts
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)