rs7217491 chr17:45171080 T>C

Sequence
aggccacactgggcaagatgaggc[T/C]tggcccaggagctgctggggatgg
ASB in cell types
CD14+ monocytes BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.28 0.84 0.010.98 1.00 n/a No Hit
STAT1_HUMAN 2.67 n/a 0.011.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Brain_Cerebellar_Hemisphere,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Nerve_Tibial,  Thyroid

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