rs7218304 chr17:34581191 T>C
- Sequence
gggtgaggatgcggcaggcgccac[T/C]ggagggggtacggggaagactggg
- ASB for transcription factors
- SCRT2_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | 1.90 | -1.63 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.00 | -1.06 | 1.67 | 0.78 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Esophagus_Muscularis, Heart_Atrial_Appendage, Minor_Salivary_Gland, Skin_Not_Sun_Exposed_Suprapubic