rs7225502 chr17:65100542 C>T
- Sequence
gccctctgccacacatcctcctct[C/T]cctcctcccggcagctcctcctcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) T47D (invasive ductal carcinoma) CTV-1 (Adult T acute lymphoblastic leukemia) KMS-11 (Plasma cell myeloma)
- ASB for transcription factors
- SPI1_HUMAN FOXK2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.29 | 1.25 | 1.40 | 5.38 | Concordant | |||
| FOXK2_HUMAN | 3.31 | -5.38 | 1.50 | n/a | n/a | |||
| CTCF_HUMAN | 0.75 | 0.69 | 1.33 | 1.34 | Weak Concordant |
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Motif analysis
