rs7227168 chr18:22933411 C>T
- Sequence
cagcccccggccttaaagcgcggg[C/T]tgtccggaggggtcggctttccca
- ASB in cell types
- 22RV1 (prostate carcinoma) HEK293 (embryonic kidney) breast tumor HCT-116 (colon carcinoma)
- ASB for transcription factors
- TYY1_HUMAN ANDR_HUMAN ZN335_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.49 | 0.70 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 3.01 | n/a | 2.00 | n/a | No Hit | |||
| ZN335_HUMAN | 2.33 | -4.79 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood