rs7228414 chr18:35054670 A>G

Sequence
tgattcccttagtttacgatggcc[A/G]aggatgtgtgggtttttttgtttg
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 0.13 2.45 0.763.1·10-4 1.57
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  alcohol dependence,  hdl cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid,  Whole_Blood

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